Sunday, April 29, 2007
1B-49
Proteomic analysis of softwood-degrading fungi towards biomimetic enzyme applications
Advances in science and technology are developing new
ways to revitalize forest industries and address consumer demands for
biodegradable materials and cleaner fuels. Biocatalysts are important tools for
harnessing the potential of wood fibres since they
can perform highly specific reactions with low environmental impact. Challenges
to bioconversion technologies as applied to wood fibres
include accessibility of plant cell wall polymers and stability of the
biocatalysts used. Moreover, differences in the molecular structure and
distribution of plant cell wall polymers in different plant species and tissues
impact bioprocess efficiency. This project describes proteomic analysis of enzymes
secreted by the white-rot basidiomycete Phanerochaete carnosa, and the brown-rot basidiomycete Postia
placenta, while transforming lignocellulosic
substrates. Proteins will be extracted from fungal cultivations and
separated by gel electrophoresis.
Protein bands will be cut and prepared for in-gel trypsin
digestion, and then characterized by MALDI-ToF/ToF. The
publicly available genome sequence of P.chrysosporium
will be used to facilitate the identification of proteins secreted by P.carnosa, while sequencing of the P. placenta
genome is currently underway and will be an important resource for protein
analysis in this study. It is anticipated that this project will identify
profiles of expressed microbial enzymes that are specific to transformation of
particular lignocellulosic fibres. This will enable tailored applications of
enzymes for processing wood fibres in the future. In
addition, the comparison of proteins secreted by P. carnosa and P.
placenta will also provide further insight into the unique
biotransformation strategies that have evolved in brown-rot and white-rot
fungi.
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See more of The 29th Symposium on Biotechnology for Fuels and Chemicals (April 29 - May 2, 2007)