Tuesday, July 28, 2009 - 11:00 AM
S72

Cyclizations of Type II Aromatic Polyketide Synthase

Sheryl Tsai, Brian Ames, Tyler Korman, and Ming Lee. Department of Molecular Biology and Biochemistry, Department of Chemistry, and Department of Pharmaceutical Sciences, University of California, Irvine, 2218 Natural Sciences I, Irvine, CA 92697-3900

Polyketides are a class of natural products with highly diverse chemical structures and pharmaceutical activities. Polyketide cyclization in Type II polyketide synthase (PKS), as promoted by the aromatase/cyclase (ARO/CYC), helps diversify aromatic polyketides. How the ARO/CYC  fosters highly specific cyclization was not well understood. The crystal structures and functional analyses of three PKS ARO/CYCs will be presented. The ARO/CYC possesses a helix-grip fold characterized by the presence of a large, solvent-accessible interior pocket. Co-crystal structures and docking simulations help visualize how the ARO/CYC interior pocket promotes specific folding of a linear polyketide and catalyzes intramolecular aldol condensation. Mutations of pocket residues, characterized by newly developed enzyme assays, further validated that the interior pocket of ARO/CYC is critical for polyketide cyclization. The chemical insights gleaned from this work pave the foundation towards defining the molecular rules for the ARO/CYC cyclization specificity, whose rational control will be important for future endeavors in the engineered biosynthesis of novel anticancer and antibiotic aromatic polyketides.


Web Page: www.pnas.org/content/105/14/5349.long