Sunday, May 3, 2009
2-78

Tracking Microbial Community Changes During Decomposition of Switchgrass

Amitha P. Reddy1, Martin Allgaier1, Phil Hugenholtz2, Blake A. Simmons3, Terry C. Hazen4, and Jean VanderGheynst5. (1) Deconstruction Division, Joint BioEnergy Institute, 5885 Hollis Street, Fourth Floor, Emeryville, CA 94608, (2) Genomics Division, Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, (3) Energy Systems, Sandia National Laboratories, 7011 East Avenue, Livermore, CA 94551, (4) Ecology, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, MS 70A-3317, Berkeley, CA 94720, (5) Biological and Agricultural Engineering, University of California, Davis, One Shields Ave, 2030 Bainer Hall, Davis, CA 95616

Many compost microbial communities have evolved to decompose lignocellulosic materials similar to those being considered for biofuel production.  Furthermore, these communities can tolerate a wide range of environmental conditions, offering great potential for enzymes that will tolerate harsh pretreatment conditions.  This study was designed to track changes in microbial and enzyme activity and community composition throughout the course of microbial colonization and decomposition of switchgrass.  Switchgrass was inoculated with finished green waste compost from a commercial facility.  Temperature was controlled to simulate a composting process with a fast ramp from 30oC to 54oC, 7 days of thermophilic levels at 54oC and a slow decrease back to 30oC over the course of 21 days.  Respiration was monitored on-line to track microbial activity and bioreactors were sampled at regular intervals for microbial community and enzyme analysis.  Carbon dioxide evolution rates (CER) peaked twice:  after one day of composting corresponding to initial consumption of sugars and again after eight days during the thermophilic phase. Comparison of 16S rRNA gene clone libraries from initial and final samples showed a significant increase in microbial diversity on the switchgrass.


Web Page: www.jbei.org